Products & Solutions
Analysis Tools
Obtain biologically meaningful results from your sequence data quickly and affordably with the powerful suite of analysis tools provided with the Genome Sequencer FLX System, updated for the GS FLX Titanium series.
| Data Management, Processing and Analysis Features | Supplied with the GS FLX System |
|---|---|
| User-friendly GUI | Yes |
| Integration with LIMS | Yes |
| Bar-code scanning | Yes |
| PHRED quality scores* | Yes |
| Trace data accepted by GenBank | Yes |
| Hardware | Yes |
| Computer Cluster (Recommended for Titanium series) | Roche solution available (link to Computing Requirements) |
| Manageable data storage | Yes |
| Software Tools | Yes |
| De novo assembly tool | Yes |
| Reference mapping tool | Yes |
| Amplicon analysis tool | Yes (Currently limited to Standard series) |
| Third-party LIMS | Yes |
| Third-party options | Yes |
*PHRED equivalent score has been developed and experimentally validated in conjunction with the Broad Institute.
GS Run Browser Software
- Interactive application displays the results of a sequencing run as well as raw images and graphic representations of various metrics files.
- Assess the quality of a run or for troubleshooting observed problems.
- Facilitates quick evaluation of the results of titration experiments.
- Easily export data to an Excel spreadsheet.
Figure 1: GS Run Browser. Example of the GS Run Browser Wells window, showing the image of an "A" flow near the beginning of a sequencing run, with the calculated wells overlaid. The green circles are wells that passed all filters, i.e. generated good sequencing results.